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  5. Vocar.0028s0107.1

Vocar.0028s0107.1 (32895601)


Aliases : 32895601

Description : Zinc finger, CCCH-type [Interproscan].


Gene families : OG_01_0000371 (OrthoFinder) Phylogenetic Tree(s): OG0000371_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0028s0107.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021590.10 tig00021590_g22767.t1 No description available 0.02 OrthoFinder
Cre03.g146267 30786551 RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder
Cz10g10230.t1 No alias Hypothetical protein 0.04 OrthoFinder
Cz10g19150.t1 No alias Hypothetical protein 0.02 OrthoFinder
Cz17g10050.t1 No alias Zinc finger, CCCH-type [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54285 54285 Zinc finger, CCCH-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 67 88
No external refs found!