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  5. Vocar.0028s0068.1

Vocar.0028s0068.1 (32895705)


Aliases : 32895705

Description : Proteasome component (PCI) domain [Interproscan].


Gene families : OG_01_0003131 (OrthoFinder) Phylogenetic Tree(s): OG0003131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0028s0068.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.37 tig00000194_g14765.t1 Protein biosynthesis.translation... 0.04 OrthoFinder
Cre13.g564250 30784684, EIF3A Protein biosynthesis.translation... 0.09 OrthoFinder
Cz05g13210.t1 No alias Proteasome component (PCI) domain [Interproscan]. 0.05 OrthoFinder
EOD23695 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
OT_07G04440.1 No alias Proteasome component (PCI) domain [Interproscan]. 0.03 OrthoFinder
Sro1610_g285820.1 Contig4416.g33187 Factor 3 subunit A 0.02 OrthoFinder
XM_002503908.1 MICPUN_94701, 94701 Proteasome component (PCI) domain [Interproscan]. 0.02 OrthoFinder
XM_003055469.1 MicpuC2_46246, 46246 Proteasome component (PCI) domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01001590.1_cds_GFH20181.1_14658 HaLaN_17263, GFH20181 Eukaryotic translation initiation factor 3 subunit 10 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59149.1_6875 PRW59149 Eukaryotic translation initiation factor 3 subunit A-like 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0004725 protein tyrosine phosphatase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008987 quinolinate synthetase A activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043085 positive regulation of catalytic activity IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044093 positive regulation of molecular function IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0110154 RNA decapping IEP Enrichment
BP GO:0110156 methylguanosine-cap decapping IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR000717 PCI_dom 387 521
No external refs found!