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  5. Vocar.0028s0060.1

Vocar.0028s0060.1 (32895733)


Aliases : 32895733

Description : Myosin head, motor domain; IQ motif, EF-hand binding site [Interproscan].


Gene families : OG_01_0000062 (OrthoFinder) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0028s0060.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000113.17 tig00000113_g5584.t1 Myosin-12 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020614.59 tig00020614_g12171.t1 Myosin-5 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020816.32 tig00020816_g14119.t1 Myosin-12 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre03.g197800 30786620 Myosin-11 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre13.g563800 30784145, MYO3 Myosin-12 OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD19528 No alias Myosin head, motor domain [Interproscan]. 0.02 OrthoFinder
PTI_05G01970.1 No alias Myosin head, motor domain [Interproscan]. 0.03 OrthoFinder
PTI_12G01740.1 No alias Ankyrin repeats (many copies); Myosin head, motor domain... 0.02 OrthoFinder
PTI_12G02850.1 No alias CBS domain; Myosin head, motor domain; PB1 domain [Interproscan]. 0.02 OrthoFinder
TP01G04680.1 No alias Myosin head, motor domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_67457 67457 Myosin head, motor domain; Dilute domain; IQ motif,... 0.01 OrthoFinder
XM_002500195.1 MICPUN_106745, 106745 Dilute domain; IQ motif, EF-hand binding site; Myosin... 0.02 OrthoFinder
XM_003061906.1 MicpuC2_28890, 28890 Dilute domain; Myosin head, motor domain; Myosin,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001609 Myosin_head_motor_dom 56 739
IPR000048 IQ_motif_EF-hand-BS 981 999
IPR000048 IQ_motif_EF-hand-BS 859 878
IPR000048 IQ_motif_EF-hand-BS 906 926
IPR000048 IQ_motif_EF-hand-BS 881 900
IPR000048 IQ_motif_EF-hand-BS 1006 1020
IPR000048 IQ_motif_EF-hand-BS 929 947
IPR000048 IQ_motif_EF-hand-BS 1041 1057
No external refs found!