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  5. Vocar.0028s0051.1

Vocar.0028s0051.1 (32895666)


Aliases : 32895666

Description : Uncharacterised protein family UPF0250 [Interproscan].


Gene families : OG_01_0003493 (OrthoFinder) Phylogenetic Tree(s): OG0003493_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0028s0051.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
XM_002506479.1 MICPUN_109559, 109559 Uncharacterised protein family UPF0250 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003293.1_cds_GFH26935.1_21412 HaLaN_25169, GFH26935 Uncharacterised protein family UPF0250 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
CC GO:0033573 high-affinity iron permease complex IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1905862 ferroxidase complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR007454 UPF0250 117 253
No external refs found!