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  5. Vocar.0028s0034.1

Vocar.0028s0034.1 (32895724)


Aliases : 32895724

Description : RING-type zinc-finger, LisH dimerisation motif [Interproscan].


Gene families : OG_01_0000209 (OrthoFinder) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0028s0034.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Dusal.1511s00001.1 33185915 Lon, substrate-binding domain; Zinc finger, C3HC4 type... 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58966.1_7353 PRW58966 DNA excision repair ERCC-8-like isoform A 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58967.1_7354 PRW58967 DNA excision repair ERCC-8-like isoform B 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498393.1_7346 KAA8498393 LON peptidase N-terminal domain and RING finger protein 1 0.02 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493495.1_4257 KAA8493495 DNA excision repair protein ERCC-8 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
CC GO:0005956 protein kinase CK2 complex IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR027370 Znf-RING_LisH 8 50
No external refs found!