Vocar.0028s0019.1 (32895518)


Aliases : 32895518

Description : WD40 repeat; EF-hand domain [Interproscan].


Gene families : OG_01_0001478 (OrthoFinder) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0028s0019.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020909.6 tig00020909_g15325.t1 No description available 0.02 OrthoFinder
Cre07.g313850 30774883 Dynein assembly factor with WDR repeat domains 1... 0.08 OrthoFinder
Cre13.g562800 30784303 No description available 0.06 OrthoFinder
Cz01g41070.t1 No alias Nucleoporin Nup120/160; WD40 repeat; EF-hand domain... 0.02 OrthoFinder
Dusal.0471s00005.1 33188520 WD40 repeat [Interproscan]. 0.02 OrthoFinder
Vocar.0003s0139.1 32889093 EF-hand domain [Interproscan]. 0.03 OrthoFinder
XM_002507803.1 MICPUN_101799, 101799 WD40 repeat; EF-hand domain [Interproscan]. 0.02 OrthoFinder
XM_003059511.1 MicpuC2_58931, 58931 Nucleoporin Nup120/160; EF-hand domain; WD40 repeat... 0.02 OrthoFinder
XM_003062148.1 MicpuC2_51771, 51771 EF-hand domain; WD40 repeat [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000623.1_cds_GFH13534.1_8011 HaLaN_09434, GFH13534 EF-hand domain [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01000867.1_cds_GFH15558.1_10035 HaLaN_11803, GFH15558 EF-hand domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002532.1_cds_GFH24423.1_18900 HaLaN_22218, GFH24423 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 713 752
IPR001680 WD40_repeat 476 503
IPR002048 EF_hand_dom 16 82
No external refs found!