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  5. Vocar.0027s0112.1

Vocar.0027s0112.1 (32887109)


Aliases : 32887109

Description : Bestrophin/UPF0187 [Interproscan].


Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0027s0112.1
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Dusal.0164s00019.1 33198390 Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
Dusal.0316s00005.1 33189593 Bestrophin/UPF0187 [Interproscan]. 0.04 OrthoFinder
PTI_10G00430.1 No alias Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_79780 79780 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000981.1_cds_GFH16334.1_10811 HaLaN_12731, GFH16334 Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33726.1_3376 PRW33726 UPF0187 chloroplastic 0.02 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33245.1_3628 PRW33245 UPF0187 chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR021134 Bestrophin/UPF0187 85 360
No external refs found!