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  5. Vocar.0027s0018.1

Vocar.0027s0018.1 (32887149)


Aliases : 32887149

Description : Cupin-like domain 8 [Interproscan].


Gene families : OG_01_0000146 (OrthoFinder) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0027s0018.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
EOD40796 No alias Cupin-like domain 8 [Interproscan]. 0.03 OrthoFinder
OT_01G04930.1 No alias Cupin-like domain 8 [Interproscan]. 0.02 OrthoFinder
TP05G03240.1 No alias Cupin-like domain 8 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_60661 60661 Hypothetical protein 0.01 OrthoFinder
XM_002507092.1 MICPUN_113605, 113605 JmjC transcription factor domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041667 Cupin_8 54 397
No external refs found!