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  5. Vocar.0025s0183.1

Vocar.0025s0183.1 (32898278)


Aliases : 32898278

Description : Atypical Arm repeat; Armadillo; Importin-alpha, importin-beta-binding domain [Interproscan].


Gene families : OG_01_0000949 (OrthoFinder) Phylogenetic Tree(s): OG0000949_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0025s0183.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cre04.g215850 30791448, IPA1 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder
Dusal.0348s00002.1 33203503 Armadillo; Atypical Arm repeat; Importin-alpha,... 0.03 OrthoFinder
EOD37589 No alias Importin-alpha, importin-beta-binding domain; Armadillo... 0.01 OrthoFinder
OT_09G03470.1 No alias Atypical Arm repeat; Importin-alpha,... 0.02 OrthoFinder
Transcript_contig_54234 54234 Atypical Arm repeat; Importin-alpha,... 0.02 OrthoFinder
XM_003057234.1 MicpuC2_56270, 56270 Armadillo; Importin-alpha, importin-beta-binding domain;... 0.02 OrthoFinder
lcl|BLLF01000307.1_cds_GFH10325.1_4802 HaLaN_05616, GFH10325 Importin subunit alpha 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006606 protein import into nucleus IEA Interproscan
MF GO:0061608 nuclear import signal receptor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR032413 Arm_3 457 507
IPR000225 Armadillo 360 398
IPR000225 Armadillo 190 231
IPR000225 Armadillo 106 146
IPR000225 Armadillo 403 440
IPR000225 Armadillo 149 187
IPR000225 Armadillo 316 357
IPR000225 Armadillo 244 272
IPR000225 Armadillo 275 313
IPR002652 Importin-a_IBB 8 95
No external refs found!