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  5. Vocar.0025s0135.1

Vocar.0025s0135.1 (32898246)


Aliases : 32898246

Description : Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0025s0135.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Cre06.g272650 30779881, LHCA8 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 OrthoFinder
Cre06.g285250 30779463, LHCBM6 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre07.g344950 30774737, LHCA9 Photosystem I chlorophyll a/b-binding protein 5,... 0.02 OrthoFinder
Cre10.g425900 30790196, LHCA5 Chlorophyll a-b binding protein 4, chloroplastic... 0.03 OrthoFinder
Cre11.g467573 30776039, LHCA3 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 OrthoFinder
Cre12.g508750 30791684, LHCA2 Photosystem I chlorophyll a/b-binding protein 6,... 0.03 OrthoFinder
Cre16.g673650 30777655, LHCB5 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre16.g687900 30778224, LHCA7 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 OrthoFinder
Cre17.g720250 30782643, LHCB4 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cz01g23030.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz03g26240.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz08g11160.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz09g32070.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz10g10160.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz12g16070.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz16g14150.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0048s00036.1 33189483 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_20G01950.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
XM_002507443.1 MICPUN_54950, 54950 Chlorophyll a/b-binding protein, chloroplast precursor (LHCA2) 0.02 OrthoFinder
lcl|BLLF01000308.1_cds_GFH10349.1_4826 HaLaN_05646, GFH10349 Chlorophyll a-b binding protein, chloroplastic 0.02 OrthoFinder
lcl|BLLF01000626.1_cds_GFH13553.1_8030 HaLaN_09459, GFH13553 Chlorophyll a-b binding protein, chloroplastic 0.01 OrthoFinder
lcl|BLLF01000742.1_cds_GFH14568.1_9045 HaLaN_10649, GFH14568 Chlorophyll a-b binding protein, chloroplastic 0.03 OrthoFinder
lcl|BLLF01000768.1_cds_GFH14802.1_9279 HaLaN_10920, GFH14802 Chlorophyll a-b binding protein, chloroplastic 0.02 OrthoFinder
lcl|BLLF01001360.1_cds_GFH18804.1_13281 HaLaN_15665, GFH18804 Chlorophyll a-b binding protein, chloroplastic 0.02 OrthoFinder
lcl|BLLF01002496.1_cds_GFH24298.1_18775 HaLaN_22066, GFH24298 Chlorophyll a-b binding protein, chloroplastic 0.03 OrthoFinder
lcl|BLLF01004483.1_cds_GFH29700.1_24177 HaLaN_28406, GFH29700 Chlorophyll a-b binding protein, chloroplastic 0.01 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45536.1_1258 PRW45536 Light-harvesting of photosystem I 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 55 220
No external refs found!