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  5. Vocar.0025s0108.1

Vocar.0025s0108.1 (32898433)


Aliases : 32898433

Description : Mitochondrial substrate/solute carrier [Interproscan].


Gene families : OG_01_0000072 (OrthoFinder) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0025s0108.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
OT_01G03890.1 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.03 OrthoFinder
Sro282_g107360.1 Contig1420.g13079 Putative mitochondrial 2-oxoglutarate/malate carrier protein 0.02 OrthoFinder
Transcript_contig_55800 55800 Mitochondrial substrate/solute carrier [Interproscan]. 0.01 OrthoFinder
XM_003064670.1 MicpuC2_49774, 49774 Mitochondrial carrier family 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497099.1_828 KAA8497099 Mitochondrial substrate carrier family protein ucpB 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Enrichment
BP GO:0006216 cytidine catabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009119 ribonucleoside metabolic process IEP Enrichment
BP GO:0009164 nucleoside catabolic process IEP Enrichment
BP GO:0009972 cytidine deamination IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Enrichment
BP GO:0042454 ribonucleoside catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046087 cytidine metabolic process IEP Enrichment
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Enrichment
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Enrichment
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
BP GO:1901658 glycosyl compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 19 113
IPR018108 Mitochondrial_sb/sol_carrier 149 244
IPR018108 Mitochondrial_sb/sol_carrier 254 340
No external refs found!