Aliases : 32890529
Description : Ribosomal protein L40e; Ubiquitin-like domain [Interproscan].
Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Vocar.0024s0156.1 | |
Cluster | HCCA: Cluster_26 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00022075.50 | tig00022075_g23611.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder | |
Cre06.g273600 | 30779902, RPS27a | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.13 | OrthoFinder | |
Cz09g22150.t1 | No alias | Ribosomal protein S27a [Interproscan]. | 0.09 | OrthoFinder | |
Cz11g28020.t1 | No alias | Ubiquitin-like domain [Interproscan]. | 0.02 | OrthoFinder | |
Cz13g16210.t1 | No alias | Ubiquitin-like domain [Interproscan]. | 0.05 | OrthoFinder | |
Dusal.0222s00011.1 | 33201848 | Ribosomal protein S27a; Ubiquitin-like domain [Interproscan]. | 0.06 | OrthoFinder | |
Dusal.0519s00002.1 | 33200370 | Ubiquitin-like domain [Interproscan]. | 0.02 | OrthoFinder | |
Dusal.0814s00004.1 | 33191920 | Ubiquitin-associated domain; Ubiquitin-like domain... | 0.03 | OrthoFinder | |
EOD06802 | No alias | Ubiquitin-like domain [Interproscan]. | 0.01 | OrthoFinder | |
EOD24536 | No alias | Ribosomal protein L41; Ubiquitin-like domain [Interproscan]. | 0.02 | OrthoFinder | |
EOD32212 | No alias | Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. | 0.09 | OrthoFinder | |
EOD34096 | No alias | Ribosomal protein L41; Ubiquitin-like domain [Interproscan]. | 0.02 | OrthoFinder | |
OT_07G00910.1 | No alias | Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. | 0.05 | OrthoFinder | |
OT_08G01740.1 | No alias | Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. | 0.05 | OrthoFinder | |
PTI_07G02070.1 | No alias | Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. | 0.08 | OrthoFinder | |
Sro305_g112730.1 | Contig560.g7114 | Polyubiquitin (Fragment) | 0.13 | OrthoFinder | |
Sro490_g153470.1 | Contig328.g4367 | Polyubiquitin (Fragment) | 0.12 | OrthoFinder | |
TP05G02210.1 | No alias | Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. | 0.12 | OrthoFinder | |
XM_002501154.1 | MICPUN_90428, 90428 | Ribosomal protein S27a; Ubiquitin-like domain [Interproscan]. | 0.11 | OrthoFinder | |
XM_002503017.1 | MICPUN_82590, 82590 | Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. | 0.06 | OrthoFinder | |
XM_002503936.1 | MICPUN_60151, 60151 | Ubiquitin-like domain [Interproscan]. | 0.02 | OrthoFinder | |
XM_003054911.1 | MicpuC2_50207, 50207 | Ubiquitin-like domain [Interproscan]. | 0.02 | OrthoFinder | |
lcl|BLLF01002296.1_cds_GFH23539.1_18016 | HaLaN_21164, GFH23539 | Ubiquitin-60S ribosomal L40 | 0.01 | OrthoFinder | |
lcl|LHPG02000002.1_cds_PRW60289.1_4387 | PRW60289 | Ubiquitin-40S ribosomal S27a | 0.04 | OrthoFinder | |
lcl|LHPG02000008.1_cds_PRW56465.1_9834 | PRW56465 | Ubiquitin-60S ribosomal L40 | 0.06 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8497057.1_786 | KAA8497057 | Ubiquitin-like protein 1-40S ribosomal protein S27a | 0.03 | OrthoFinder | |
lcl|VRMN01000006.1_cds_KAA8493558.1_4320 | KAA8493558 | Ubiquitin-60S ribosomal protein L40-2 | 0.07 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005739 | mitochondrion | IEP | Enrichment |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Enrichment |
CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | Enrichment |
CC | GO:0005783 | endoplasmic reticulum | IEP | Enrichment |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
BP | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | IEP | Enrichment |
BP | GO:0006486 | protein glycosylation | IEP | Enrichment |
BP | GO:0006487 | protein N-linked glycosylation | IEP | Enrichment |
BP | GO:0007021 | tubulin complex assembly | IEP | Enrichment |
BP | GO:0007023 | post-chaperonin tubulin folding pathway | IEP | Enrichment |
CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Enrichment |
MF | GO:0008417 | fucosyltransferase activity | IEP | Enrichment |
BP | GO:0009060 | aerobic respiration | IEP | Enrichment |
BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | Enrichment |
BP | GO:0019646 | aerobic electron transport chain | IEP | Enrichment |
CC | GO:0019866 | organelle inner membrane | IEP | Enrichment |
BP | GO:0022900 | electron transport chain | IEP | Enrichment |
BP | GO:0022904 | respiratory electron transport chain | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043413 | macromolecule glycosylation | IEP | Enrichment |
CC | GO:0045275 | respiratory chain complex III | IEP | Enrichment |
BP | GO:0045333 | cellular respiration | IEP | Enrichment |
MF | GO:0048487 | beta-tubulin binding | IEP | Enrichment |
CC | GO:0070069 | cytochrome complex | IEP | Enrichment |
BP | GO:0070085 | glycosylation | IEP | Enrichment |
CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
CC | GO:0098798 | mitochondrial protein-containing complex | IEP | Enrichment |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Enrichment |
CC | GO:0098803 | respiratory chain complex | IEP | Enrichment |
CC | GO:1902494 | catalytic complex | IEP | Enrichment |
CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
No external refs found! |