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  5. Vocar.0024s0109.1

Vocar.0024s0109.1 (32890527)


Aliases : 32890527

Description : ABC transporter-like; ABC-2 family transporter protein [Interproscan].


Gene families : OG_01_0000157 (OrthoFinder) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0024s0109.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000057.66 tig00000057_g89.t1 ABC transporter A family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000057.67 tig00000057_g90.t1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cre03.g151400 30787934 Solute transport.primary active transport.ABC... 0.03 OrthoFinder
Dusal.0282s00013.1 33199281 Hypothetical protein 0.02 OrthoFinder
EOD36771 No alias ABC-2 family transporter protein; ABC transporter-like... 0.02 OrthoFinder
EOD37675 No alias ABC-2 family transporter protein; ABC transporter-like... 0.02 OrthoFinder
PTI_18G02470.1 No alias ABC transporter-like [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold308.5 308.5 ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Transcript_contig_59645 59645 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000177.1_cds_GFH08677.1_3154 HaLaN_03677, GFH08677 ABC transporter domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0005516 calmodulin binding IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1185 1328
No external refs found!