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  5. Vocar.0024s0068.1

Vocar.0024s0068.1 (32890333)


Aliases : 32890333

Description : F-box domain; Domain of unknown function DUF3506 [Interproscan].


Gene families : OG_01_0001272 (OrthoFinder) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0024s0068.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre03.g163500 30788242, CGLD21 Protein EXECUTER 2, chloroplastic OS=Oryza sativa subsp. japonica 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR021894 DUF3506 354 420
IPR001810 F-box_dom 18 56
No external refs found!