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  5. Vocar.0023s0189.1

Vocar.0023s0189.1 (32883365)


Aliases : 32883365

Description : TATA box binding protein associated factor (TAF); TAF6, C-terminal HEAT repeat domain [Interproscan].


Gene families : OG_01_0003054 (OrthoFinder) Phylogenetic Tree(s): OG0003054_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0023s0189.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cz02g38270.t1 No alias TAF6, C-terminal HEAT repeat domain; TATA box binding... 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8500055.1_9008 KAA8500055 Transcription initiation factor TFIID subunit 6 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006906 vesicle fusion IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007030 Golgi organization IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016050 vesicle organization IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Enrichment
BP GO:0048284 organelle fusion IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0061025 membrane fusion IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0090174 organelle membrane fusion IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR011442 TAF6_C 366 452
IPR004823 TAF_TATA-bd 2 66
No external refs found!