Vocar.0023s0101.1 (32883441)

Aliases : 32883441

Description : Threonyl/alanyl tRNA synthetase, SAD [Interproscan].

Gene families : OG_01_0013184 (OrthoFinder) Phylogenetic Tree(s): OG0013184_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0023s0101.1
Cluster	HCCA: Cluster_105

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000009	alpha-1,6-mannosyltransferase activity	IEP	Enrichment
MF	GO:0000030	mannosyltransferase activity	IEP	Enrichment
BP	GO:0000041	transition metal ion transport	IEP	Enrichment
MF	GO:0004376	glycolipid mannosyltransferase activity	IEP	Enrichment
MF	GO:0004665	prephenate dehydrogenase (NADP+) activity	IEP	Enrichment
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006270	DNA replication initiation	IEP	Enrichment
BP	GO:0006284	base-excision repair	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006497	protein lipidation	IEP	Enrichment
BP	GO:0006505	GPI anchor metabolic process	IEP	Enrichment
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Enrichment
BP	GO:0006570	tyrosine metabolic process	IEP	Enrichment
BP	GO:0006571	tyrosine biosynthetic process	IEP	Enrichment
BP	GO:0006643	membrane lipid metabolic process	IEP	Enrichment
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Enrichment
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Enrichment
BP	GO:0006664	glycolipid metabolic process	IEP	Enrichment
BP	GO:0006826	iron ion transport	IEP	Enrichment
MF	GO:0008168	methyltransferase activity	IEP	Enrichment
MF	GO:0008173	RNA methyltransferase activity	IEP	Enrichment
MF	GO:0008977	prephenate dehydrogenase (NAD+) activity	IEP	Enrichment
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Enrichment
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Enrichment
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Enrichment
BP	GO:0009247	glycolipid biosynthetic process	IEP	Enrichment
BP	GO:0009894	regulation of catabolic process	IEP	Enrichment
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Enrichment
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Enrichment
CC	GO:0031082	BLOC complex	IEP	Enrichment
CC	GO:0031083	BLOC-1 complex	IEP	Enrichment
BP	GO:0031329	regulation of cellular catabolic process	IEP	Enrichment
CC	GO:0033573	high-affinity iron permease complex	IEP	Enrichment
BP	GO:0034755	iron ion transmembrane transport	IEP	Enrichment
MF	GO:0035596	methylthiotransferase activity	IEP	Enrichment
BP	GO:0043487	regulation of RNA stability	IEP	Enrichment
BP	GO:0043488	regulation of mRNA stability	IEP	Enrichment
BP	GO:0044528	regulation of mitochondrial mRNA stability	IEP	Enrichment
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Enrichment
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Enrichment
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Enrichment
BP	GO:0046486	glycerolipid metabolic process	IEP	Enrichment
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0050497	alkylthioltransferase activity	IEP	Enrichment
BP	GO:0051259	protein complex oligomerization	IEP	Enrichment
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Enrichment
BP	GO:0061013	regulation of mRNA catabolic process	IEP	Enrichment
CC	GO:0098797	plasma membrane protein complex	IEP	Enrichment
CC	GO:1902494	catalytic complex	IEP	Enrichment
CC	GO:1902495	transmembrane transporter complex	IEP	Enrichment
BP	GO:1903311	regulation of mRNA metabolic process	IEP	Enrichment
BP	GO:1903509	liposaccharide metabolic process	IEP	Enrichment
CC	GO:1905862	ferroxidase complex	IEP	Enrichment
CC	GO:1990204	oxidoreductase complex	IEP	Enrichment
CC	GO:1990351	transporter complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR012947	tRNA_SAD	347	381

External Links

No external refs found!

Vocar.0023s0101.1 (32883441)

Expression Profile

Co-expression Networks

Functional Annotation