Vocar.0023s0047.1 (32883229)


Aliases : 32883229

Description : tRNA methyl transferase [Interproscan].


Gene families : OG_01_0001404 (OrthoFinder) Phylogenetic Tree(s): OG0001404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0023s0047.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Cz14g24100.t1 No alias tRNA methyl transferase [Interproscan]. 0.02 OrthoFinder
Dusal.0173s00013.1 33191837 tRNA methyl transferase [Interproscan]. 0.02 OrthoFinder
PTI_14G02700.1 No alias tRNA methyl transferase [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000105 histidine biosynthetic process IEP Enrichment
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!