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  5. Vocar.0022s0228.1

Vocar.0022s0228.1 (32891960)


Aliases : 32891960

Description : Cdk-activating kinase assembly factor MAT1, centre [Interproscan].


Gene families : OG_01_0001180 (OrthoFinder) Phylogenetic Tree(s): OG0001180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0022s0228.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
XM_002509210.1 MICPUN_63142, 63142 Cdk-activating kinase assembly factor MAT1, centre... 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56035.1_10021 PRW56035 CDK-activating kinase assembly factor MAT1 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498791.1_7744 KAA8498791 RNA polymerase II transcription factor B subunit 3 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR015877 Cdk-activating_kinase_MAT1_cen 2 83
No external refs found!