Aliases : 32891963
Description : PRP1 splicing factor, N-terminal; Tetratricopeptide repeat [Interproscan].
Gene families : OG_01_0001986 (OrthoFinder) Phylogenetic Tree(s): OG0001986_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Vocar.0022s0221.1 | |
Cluster | HCCA: Cluster_24 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000880.19 | tig00000880_g5175.t1 | Protein STABILIZED1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cre14.g633650 | 30776534, PRP6 | RNA processing.RNA splicing.U2-type-intron-specific... | 0.05 | OrthoFinder | |
Cz07g30240.t1 | No alias | PRP1 splicing factor, N-terminal; Tetratricopeptide... | 0.02 | OrthoFinder | |
EOD22460 | No alias | Tetratricopeptide repeat; PRP1 splicing factor,... | 0.03 | OrthoFinder | |
OT_14G03060.1 | No alias | Tetratricopeptide repeat; PRP1 splicing factor,... | 0.03 | OrthoFinder | |
PTI_08G04110.1 | No alias | Tetratricopeptide repeat; PRP1 splicing factor,... | 0.02 | OrthoFinder | |
Sro987_g228260.1 | Contig1137.g10933 | mRNA-processing factor 6 | 0.04 | OrthoFinder | |
XM_003059615.1 | MicpuC2_70858, 70858 | MRNA splicing protein | 0.02 | OrthoFinder | |
lcl|BLLF01003223.1_cds_GFH26738.1_21215 | HaLaN_24934, GFH26738 | TPR_REGION domain-containing protein | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000398 | mRNA splicing, via spliceosome | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003682 | chromatin binding | IEP | Enrichment |
MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
MF | GO:0003774 | motor activity | IEP | Enrichment |
MF | GO:0003777 | microtubule motor activity | IEP | Enrichment |
MF | GO:0004484 | mRNA guanylyltransferase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
BP | GO:0006281 | DNA repair | IEP | Enrichment |
BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
BP | GO:0006338 | chromatin remodeling | IEP | Enrichment |
BP | GO:0006370 | 7-methylguanosine mRNA capping | IEP | Enrichment |
BP | GO:0006508 | proteolysis | IEP | Enrichment |
BP | GO:0006606 | protein import into nucleus | IEP | Enrichment |
BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Enrichment |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Enrichment |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
BP | GO:0007018 | microtubule-based movement | IEP | Enrichment |
MF | GO:0008017 | microtubule binding | IEP | Enrichment |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Enrichment |
MF | GO:0008192 | RNA guanylyltransferase activity | IEP | Enrichment |
BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Enrichment |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | Enrichment |
MF | GO:0015631 | tubulin binding | IEP | Enrichment |
MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
BP | GO:0017038 | protein import | IEP | Enrichment |
CC | GO:0017119 | Golgi transport complex | IEP | Enrichment |
BP | GO:0030163 | protein catabolic process | IEP | Enrichment |
MF | GO:0031491 | nucleosome binding | IEP | Enrichment |
BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
BP | GO:0034504 | protein localization to nucleus | IEP | Enrichment |
BP | GO:0036260 | RNA capping | IEP | Enrichment |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Enrichment |
BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Enrichment |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
BP | GO:0051169 | nuclear transport | IEP | Enrichment |
BP | GO:0051170 | import into nucleus | IEP | Enrichment |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
MF | GO:0070403 | NAD+ binding | IEP | Enrichment |
MF | GO:0070568 | guanylyltransferase activity | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR010491 | PRP1_N | 27 | 173 |
No external refs found! |