Vocar.0022s0166.1 (32891895)


Aliases : 32891895

Description : SAM-dependent methyltransferase TRM5/TYW2-type [Interproscan].


Gene families : OG_01_0002125 (OrthoFinder) Phylogenetic Tree(s): OG0002125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0022s0166.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cre16.g672041 30777796 RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497608.1_6561 KAA8497608 TRNA (guanine(37)-N1)-methyltransferase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005813 centrosome IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007098 centrosome cycle IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0031023 microtubule organizing center organization IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR030382 MeTrfase_TRM5/TYW2 210 494
No external refs found!