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  5. Vocar.0022s0092.1

Vocar.0022s0092.1 (32891873)


Aliases : 32891873

Description : HEAT repeat; Importin repeat 4 [Interproscan].


Gene families : OG_01_0000711 (OrthoFinder) Phylogenetic Tree(s): OG0000711_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0022s0092.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000237.33 tig00000237_g20482.t1 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder
Cpa|evm.model.tig00001030.13 tig00001030_g6453.t1 Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder
Cpa|evm.model.tig00001030.14 tig00001030_g6453.t1 No description available 0.02 OrthoFinder
Cre14.g633750 30776542 Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder
Cz02g21420.t1 No alias HEAT repeats; Importin-beta, N-terminal domain [Interproscan]. 0.06 OrthoFinder
Dusal.0285s00009.1 33192896 HEAT-like repeat [Interproscan]. 0.02 OrthoFinder
EOD38465 No alias Importin-beta, N-terminal domain; Importin repeat 4;... 0.03 OrthoFinder
OT_18G01010.1 No alias Importin repeat 4; HEAT repeats [Interproscan]. 0.03 OrthoFinder
UNPLg00185.t1 No alias HEAT repeats; Importin repeat 4 [Interproscan]. 0.05 OrthoFinder
XM_002500637.1 MICPUN_80369, 80369 Importin repeat 4; HEAT repeats [Interproscan]. 0.03 OrthoFinder
XM_003064319.1 MicpuC2_37032, 37032 HEAT-like repeat; Importin repeat 4 [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61517.1_738 PRW61517 ARM repeat-containing isoform A 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61518.1_739 PRW61518 ARM repeat-containing isoform B 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008987 quinolinate synthetase A activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043085 positive regulation of catalytic activity IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044093 positive regulation of molecular function IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0110154 RNA decapping IEP Enrichment
BP GO:0110156 methylguanosine-cap decapping IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR041653 Importin_rep_4 283 373
IPR000357 HEAT 424 448
No external refs found!