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  5. Vocar.0022s0048.1

Vocar.0022s0048.1 (32891912)


Aliases : 32891912

Description : Tetratricopeptide repeat 2; Tetratricopeptide repeat [Interproscan].


Gene families : OG_01_0010919 (OrthoFinder) Phylogenetic Tree(s): OG0010919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0022s0048.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001374.3 tig00001374_g8494.t1 No description available 0.02 OrthoFinder
Cre05.g238260 30783051 No description available 0.05 OrthoFinder
Dusal.0952s00001.1 33200117 Tetratricopeptide repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR013105 TPR_2 484 515
No external refs found!