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  5. Vocar.0021s0106.1

Vocar.0021s0106.1 (32895877)


Aliases : 32895877

Description : ABC-transporter extension domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000132 (OrthoFinder) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0021s0106.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Cre02.g095200 30785790 ABC transporter F family member 4 OS=Arabidopsis thaliana 0.02 OrthoFinder
Sro2585_g331900.1 Contig1533.g13925 Tylosin resistance ATP-binding protein TlrC 0.01 OrthoFinder
Sro365_g127370.1 Contig3612.g27911 Tylosin resistance ATP-binding protein TlrC 0.01 OrthoFinder
lcl|BLLF01000797.1_cds_GFH15030.1_9507 HaLaN_11184, GFH15030 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
BP GO:0046937 phytochelatin metabolic process IEP Enrichment
BP GO:0046938 phytochelatin biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 93 128
IPR032781 ABC_tran_Xtn 411 487
IPR003439 ABC_transporter-like_ATP-bd 280 368
IPR003439 ABC_transporter-like_ATP-bd 624 811
No external refs found!