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  5. Vocar.0021s0088.1

Vocar.0021s0088.1 (32896059)


Aliases : 32896059

Description : 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II [Interproscan].


Gene families : OG_01_0000582 (OrthoFinder) Phylogenetic Tree(s): OG0000582_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0021s0088.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
EOD15282 No alias 3,4-dihydroxy-2-butanone-4-phosphate synthase [Ensembl]. 0.01 OrthoFinder
EOD21944 No alias 3,4-dihydroxy-2-butanone-4-phosphate synthase [Ensembl]. 0.01 OrthoFinder
Transcript_contig_58499 58499 GTP cyclohydrolase II [Interproscan]. 0.02 OrthoFinder
XM_003058649.1 MicpuC2_45490, 45490 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEA Interproscan
BP GO:0009231 riboflavin biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006007 glucose catabolic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019320 hexose catabolic process IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046365 monosaccharide catabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000422 DHBP_synthase_RibB 88 281
IPR032677 GTP_cyclohydro_II 308 446
No external refs found!