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  5. Vocar.0021s0037.1

Vocar.0021s0037.1 (32896036)


Aliases : 32896036

Description : Proteasomal ATPase OB C-terminal domain; ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain [Interproscan].


Gene families : OG_01_0001839 (OrthoFinder) Phylogenetic Tree(s): OG0001839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0021s0037.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.6 tig00000718_g3683.t1 Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder
Cre17.g710150 30782016, RPT4 Protein degradation.26S proteasome.regulatory... 0.09 OrthoFinder
Cz03g32090.t1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.04 OrthoFinder
Dusal.0070s00030.1 33189323 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.02 OrthoFinder
EOD05789 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.06 OrthoFinder
OT_03G03400.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.03 OrthoFinder
PTI_06G01270.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.06 OrthoFinder
Sro545_g163780.1 Contig1180.g11221 S10B homolog B 0.08 OrthoFinder
TP05G08640.1 No alias Hypothetical protein 0.01 OrthoFinder
TP12G00010.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.06 OrthoFinder
XM_002499385.1 MICPUN_78817, 78817 Proteasomal ATPase 0.01 OrthoFinder
XM_003055727.1 MicpuC2_70911, 70911 Proteasomal ATPase 0.02 OrthoFinder
lcl|BLLF01001377.1_cds_GFH18904.1_13381 HaLaN_15778, GFH18904 26S proteasome regulatory subunit 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59372.1_7107 PRW59372 26S proteasome regulatory ATPase RPT4 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494848.1_3378 KAA8494848 26S protease regulatory subunit 10B-like A 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003856 3-dehydroquinate synthase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005892 acetylcholine-gated channel complex IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043235 receptor complex IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
CC GO:0098802 plasma membrane signaling receptor complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 309 363
IPR003959 ATPase_AAA_core 173 237
IPR032501 Prot_ATP_ID_OB 60 115
IPR041569 AAA_lid_3 385 429
No external refs found!