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  5. Vocar.0020s0147.1

Vocar.0020s0147.1 (32886720)


Aliases : 32886720

Description : Rhodanase, C-terminal; Rhodanese-like domain; UPF0176, acylphosphatase-like domain [Interproscan].


Gene families : OG_01_0000348 (OrthoFinder) Phylogenetic Tree(s): OG0000348_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0020s0147.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Cz03g15310.t1 No alias Rhodanase, C-terminal [Interproscan]. 0.02 OrthoFinder
OT_13G00290.1 No alias UPF0176, acylphosphatase-like domain; Rhodanese-like... 0.03 OrthoFinder
Sro143_g066680.1 Contig3754.g28774 UPF0176 protein 0.01 OrthoFinder
Sro516_g158450.1 Contig3306.g25909 UPF0176 protein 0.02 OrthoFinder
TP01G10750.1 No alias UPF0176, acylphosphatase-like domain [Interproscan]. 0.02 OrthoFinder
TP11G00670.1 No alias UPF0176, acylphosphatase-like domain; Rhodanese-like... 0.02 OrthoFinder
Transcript_contig_55821 55821 UPF0176, acylphosphatase-like domain [Interproscan]. 0.01 OrthoFinder
XM_003062322.1 MicpuC2_52148, 52148 Rhodanese-like domain; Rhodanase, C-terminal; UPF0176,... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001763 Rhodanese-like_dom 206 305
IPR040503 TRHO_N 87 176
IPR022111 Rhodanese_C 314 402
No external refs found!