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  5. Vocar.0020s0117.1

Vocar.0020s0117.1 (32886713)


Aliases : 32886713

Description : Pentacotripeptide-repeat region of PRORP; Pentatricopeptide repeat [Interproscan].


Gene families : OG_01_0005332 (OrthoFinder) Phylogenetic Tree(s): OG0005332_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0020s0117.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre08.g358250 30773680, MCA1 Pentatricopeptide repeat-containing protein At5g02860... 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR033443 PPR_long 995 1108
IPR002885 Pentatricopeptide_repeat 486 546
IPR002885 Pentatricopeptide_repeat 573 600
No external refs found!