Vocar.0020s0028.1 (32886611)


Aliases : 32886611

Description : Ubiquitin-associated domain; XPC-binding domain; Ubiquitin-like domain [Interproscan].


Gene families : OG_01_0001949 (OrthoFinder) Phylogenetic Tree(s): OG0001949_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0020s0028.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.21 tig00020848_g14548.t1 Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre08.g366400 30773546 Ubiquitin receptor RAD23b OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz08g10150.t1 No alias Ubiquitin-like domain; XPC-binding domain;... 0.02 OrthoFinder
PTI_02G03870.1 No alias Ubiquitin-like domain; Ubiquitin-associated domain;... 0.05 OrthoFinder
TP06G07410.1 No alias Ubiquitin-like domain; Ubiquitin-associated domain;... 0.02 OrthoFinder
Transcript_contig_55102 55102 Ubiquitin-associated domain; Ubiquitin-like domain;... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006289 nucleotide-excision repair IEA Interproscan
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004484 mRNA guanylyltransferase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006370 7-methylguanosine mRNA capping IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0019905 syntaxin binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 73
IPR015940 UBA 347 382
IPR015940 UBA 149 183
IPR015360 XPC-bd 261 316
No external refs found!