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  5. Vocar.0020s0022.1

Vocar.0020s0022.1 (32886711)


Aliases : 32886711

Description : NET domain; Bromodomain [Interproscan].


Gene families : OG_01_0000168 (OrthoFinder) Phylogenetic Tree(s): OG0000168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0020s0022.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.150 tig00020553_g10641.t1 No description available 0.03 OrthoFinder
Cre08.g367300 30773991 Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz04g12100.t1 No alias Bromodomain [Interproscan]. 0.02 OrthoFinder
Cz18g12180.t1 No alias Bromodomain [Interproscan]. 0.03 OrthoFinder
Dusal.1152s00002.1 33195168 Bromodomain [Interproscan]. 0.02 OrthoFinder
TP11G01150.1 No alias Bromodomain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001787.1_cds_GFH21240.1_15717 HaLaN_18501, GFH21240 NET domain; Bromodomain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57142.1_9317 PRW57142 Transcription factor GTE8-like 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001487 Bromodomain 101 180
IPR027353 NET_dom 250 296
No external refs found!