Vocar.0020s0007.1 (32886651)

Aliases : 32886651

Description : Ribosomal protein L47, mitochondrial [Interproscan].

Gene families : OG_01_0003518 (OrthoFinder) Phylogenetic Tree(s): OG0003518_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0020s0007.1
Cluster	HCCA: Cluster_108

Target	Alias	Description	ECC score	Gene Family Method
Cz08g10160.t1	No alias	Ribosomal protein L47, mitochondrial [Interproscan].	0.03	OrthoFinder
Dusal.0172s00004.1	33188492	Ribosomal protein L47, mitochondrial [Interproscan].	0.02	OrthoFinder
Sro226_g092030.1	Contig565.g7175	39S ribosomal protein L47, mitochondrial	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0000313	organellar ribosome	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005761	mitochondrial ribosome	IEA	Interproscan
CC	GO:0005840	ribosome	None	Extended
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Enrichment
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Enrichment
BP	GO:0016485	protein processing	IEP	Enrichment
BP	GO:0051604	protein maturation	IEP	Enrichment
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Enrichment
BP	GO:0071586	CAAX-box protein processing	IEP	Enrichment
CC	GO:0072546	EMC complex	IEP	Enrichment
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR010729	Ribosomal_L47_mit	39	141

External Links

No external refs found!

Vocar.0020s0007.1 (32886651)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation