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  5. Vocar.0019s0142.1

Vocar.0019s0142.1 (32892865)


Aliases : 32892865

Description : 3'-5' exonuclease domain [Interproscan].


Gene families : OG_01_0000497 (OrthoFinder) Phylogenetic Tree(s): OG0000497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0019s0142.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Dusal.0916s00003.1 33190594 Exosome-associated factor Rrp6, N-terminal; 3'-5'... 0.03 OrthoFinder
Transcript_contig_54520 54520 3'-5' exonuclease domain; HRDC domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_79002 79002 Hypothetical protein 0.01 OrthoFinder
UNPLg00390.t1 No alias HRDC domain; 3'-5' exonuclease domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
InterPro domains Description Start Stop
IPR002562 3'-5'_exonuclease_dom 408 510
No external refs found!