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  5. Vocar.0019s0108.1

Vocar.0019s0108.1 (32892754)


Aliases : 32892754

Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0004811 (OrthoFinder) Phylogenetic Tree(s): OG0004811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0019s0108.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cre03.g158950 30787699 RNA processing.RNA splicing.U2-type-intron-specific... 0.04 OrthoFinder
PTI_11G01560.1 No alias RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
UNPLg00199.t1 No alias RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0004857 enzyme inhibitor activity IEP Enrichment
MF GO:0004864 protein phosphatase inhibitor activity IEP Enrichment
MF GO:0004865 protein serine/threonine phosphatase inhibitor activity IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP Enrichment
BP GO:0010563 negative regulation of phosphorus metabolic process IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
BP GO:0010923 negative regulation of phosphatase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0016559 peroxisome fission IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0019208 phosphatase regulator activity IEP Enrichment
MF GO:0019212 phosphatase inhibitor activity IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0031400 negative regulation of protein modification process IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
BP GO:0035305 negative regulation of dephosphorylation IEP Enrichment
BP GO:0035308 negative regulation of protein dephosphorylation IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0043086 negative regulation of catalytic activity IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0044092 negative regulation of molecular function IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
BP GO:0045936 negative regulation of phosphate metabolic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0048285 organelle fission IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051248 negative regulation of protein metabolic process IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
BP GO:0051346 negative regulation of hydrolase activity IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 21 87
No external refs found!