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  5. Vocar.0019s0082.1

Vocar.0019s0082.1 (32892731)


Aliases : 32892731

Description : PPM-type phosphatase domain; Carbohydrate binding module family 20 [Interproscan].


Gene families : OG_01_0000226 (OrthoFinder) Phylogenetic Tree(s): OG0000226_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0019s0082.1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cz15g04100.t1 No alias PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
XM_003055356.1 MicpuC2_5690, 5690 PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000135.1_cds_GFH08068.1_2545 HaLaN_02972, GFH08068 Protein phosphatase 0.02 OrthoFinder
lcl|BLLF01000677.1_cds_GFH14020.1_8497 HaLaN_09993, GFH14020 Protein phosphatase 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495707.1_1705 KAA8495707 Putative protein phosphatase 2C 80 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
CC GO:0019008 molybdopterin synthase complex IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0031329 regulation of cellular catabolic process IEP Enrichment
BP GO:0043487 regulation of RNA stability IEP Enrichment
BP GO:0043488 regulation of mRNA stability IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0044528 regulation of mitochondrial mRNA stability IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0061013 regulation of mRNA catabolic process IEP Enrichment
BP GO:1903311 regulation of mRNA metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 1615 1772
IPR002044 CBM_fam20 85 171
No external refs found!