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  5. Vocar.0019s0063.1

Vocar.0019s0063.1 (32892864)


Aliases : 32892864

Description : RNA-binding domain, S1, IF1 type [Interproscan].


Gene families : OG_01_0002987 (OrthoFinder) Phylogenetic Tree(s): OG0002987_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0019s0063.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Cre03.g155800 30787193 No description available 0.04 OrthoFinder
Cz14g14220.t1 No alias RNA-binding domain, S1, IF1 type [Interproscan]. 0.02 OrthoFinder
Sro1553_g281980.1 Contig1252.g11693 Probable RNA-binding protein EIF1AD 0.01 OrthoFinder
Sro3736_g350710.1 Contig4671.g34727 Probable RNA-binding protein EIF1AD 0.01 OrthoFinder
lcl|BLLF01000721.1_cds_GFH14399.1_8876 HaLaN_10445, GFH14399 RNA-binding EIF1AD 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
CC GO:0030915 Smc5-Smc6 complex IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0071569 protein ufmylation IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
CC GO:0106068 SUMO ligase complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR006196 RNA-binding_domain_S1_IF1 22 75
No external refs found!