Vocar.0019s0052.1 (32892859)

Aliases : 32892859

Description : SNU66/SART1 family [Interproscan].

Gene families : OG_01_0003307 (OrthoFinder) Phylogenetic Tree(s): OG0003307_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0019s0052.1
Cluster	HCCA: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method
Cre03.g156100	30786859	SART-1 family protein DOT2 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cz04g33110.t1	No alias	SNU66/SART1 family [Interproscan].	0.02	OrthoFinder
Transcript_contig_70717	70717	SNU66/SART1 family [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	None	Extended
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	None	Extended
BP	GO:0000398	mRNA splicing, via spliceosome	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
MF	GO:0005543	phospholipid binding	IEP	Enrichment
BP	GO:0006298	mismatch repair	IEP	Enrichment
BP	GO:0006354	DNA-templated transcription, elongation	IEP	Enrichment
BP	GO:0006368	transcription elongation from RNA polymerase II promoter	IEP	Enrichment
CC	GO:0008023	transcription elongation factor complex	IEP	Enrichment
MF	GO:0008289	lipid binding	IEP	Enrichment
BP	GO:0016569	covalent chromatin modification	IEP	Enrichment
BP	GO:0016570	histone modification	IEP	Enrichment
CC	GO:0016593	Cdc73/Paf1 complex	IEP	Enrichment
MF	GO:0030983	mismatched DNA binding	IEP	Enrichment
MF	GO:0035091	phosphatidylinositol binding	IEP	Enrichment
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005011	SNU66/SART1	12	792

External Links

No external refs found!