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Aliases : 32898463
Description : IBR domain [Interproscan].
Gene families : OG_01_0000507 (OrthoFinder) Phylogenetic Tree(s): OG0000507_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0018s0139.1 | |
| Cluster | HCCA: Cluster_112 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EOD22420 | No alias | IBR domain; Zinc finger, C3HC4 RING-type [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_31G00390.1 | No alias | IBR domain [Interproscan]. | 0.01 | OrthoFinder | |
| Sro2_g001650.1 | Contig467.g6323 | IBR domain-containing protein 1 | 0.02 | OrthoFinder | |
| SymbC1.scaffold448.3 | 448.3 | IBR domain [Interproscan]. | 0.01 | OrthoFinder | |
| Transcript_contig_54036 | 54036 | IBR domain [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_54525 | 54525 | IBR domain [Interproscan]. | 0.01 | OrthoFinder | |
| XM_002508933.1 | MICPUN_87045, 87045 | IBR domain [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01001571.1_cds_GFH20080.1_14557 | HaLaN_17146, GFH20080 | RBR-type E3 ubiquitin transferase | 0.02 | OrthoFinder | |
| lcl|BLLF01007235.1_cds_GFH32845.1_27322 | HaLaN_32132, GFH32845 | RBR-type E3 ubiquitin transferase | 0.02 | OrthoFinder | |
| lcl|LHPG02000002.1_cds_PRW60234.1_4427 | PRW60234 | Putative E3 ubiquitin-ligase ARI2 isoform X1 | 0.06 | OrthoFinder | |
| lcl|LHPG02000005.1_cds_PRW58138.1_7630 | PRW58138 | Putative E3 ubiquitin-ligase ARI8 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003682 | chromatin binding | IEP | Enrichment |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Enrichment |
| MF | GO:0003951 | NAD+ kinase activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0005096 | GTPase activator activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005681 | spliceosomal complex | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| CC | GO:0005892 | acetylcholine-gated channel complex | IEP | Enrichment |
| BP | GO:0006338 | chromatin remodeling | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006739 | NADP metabolic process | IEP | Enrichment |
| BP | GO:0006741 | NADP biosynthetic process | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Enrichment |
| BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Enrichment |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Enrichment |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Enrichment |
| MF | GO:0031491 | nucleosome binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| CC | GO:0034702 | ion channel complex | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| BP | GO:0036260 | RNA capping | IEP | Enrichment |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Enrichment |
| BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| CC | GO:0043235 | receptor complex | IEP | Enrichment |
| MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Enrichment |
| CC | GO:0090730 | Las1 complex | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| CC | GO:0098802 | plasma membrane signaling receptor complex | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| CC | GO:1902495 | transmembrane transporter complex | IEP | Enrichment |
| CC | GO:1902555 | endoribonuclease complex | IEP | Enrichment |
| CC | GO:1902911 | protein kinase complex | IEP | Enrichment |
| CC | GO:1905354 | exoribonuclease complex | IEP | Enrichment |
| CC | GO:1990351 | transporter complex | IEP | Enrichment |
| No external refs found! |