Vocar.0018s0139.1 (32898463)


Aliases : 32898463

Description : IBR domain [Interproscan].


Gene families : OG_01_0000507 (OrthoFinder) Phylogenetic Tree(s): OG0000507_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0018s0139.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
EOD22420 No alias IBR domain; Zinc finger, C3HC4 RING-type [Interproscan]. 0.02 OrthoFinder
PTI_31G00390.1 No alias IBR domain [Interproscan]. 0.01 OrthoFinder
Sro2_g001650.1 Contig467.g6323 IBR domain-containing protein 1 0.02 OrthoFinder
SymbC1.scaffold448.3 448.3 IBR domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_54036 54036 IBR domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54525 54525 IBR domain [Interproscan]. 0.01 OrthoFinder
XM_002508933.1 MICPUN_87045, 87045 IBR domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001571.1_cds_GFH20080.1_14557 HaLaN_17146, GFH20080 RBR-type E3 ubiquitin transferase 0.02 OrthoFinder
lcl|BLLF01007235.1_cds_GFH32845.1_27322 HaLaN_32132, GFH32845 RBR-type E3 ubiquitin transferase 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60234.1_4427 PRW60234 Putative E3 ubiquitin-ligase ARI2 isoform X1 0.06 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58138.1_7630 PRW58138 Putative E3 ubiquitin-ligase ARI8 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005892 acetylcholine-gated channel complex IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043235 receptor complex IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
CC GO:0090730 Las1 complex IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098802 plasma membrane signaling receptor complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1902555 endoribonuclease complex IEP Enrichment
CC GO:1902911 protein kinase complex IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR002867 IBR_dom 276 322
IPR002867 IBR_dom 195 259
No external refs found!