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  5. Vocar.0018s0028.1

Vocar.0018s0028.1 (32898476)


Aliases : 32898476

Description : Initiation factor 2B-related; Aminoglycoside phosphotransferase [Interproscan].


Gene families : OG_01_0002077 (OrthoFinder) Phylogenetic Tree(s): OG0002077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0018s0028.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_55132 55132 Initiation factor 2B-related; Aminoglycoside... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0044237 cellular metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006825 copper ion transport IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0035434 copper ion transmembrane transport IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002575 Aminoglycoside_PTrfase 448 688
IPR000649 IF-2B-related 52 359
No external refs found!