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  5. Vocar.0017s0208.1

Vocar.0017s0208.1 (32891523)


Aliases : 32891523

Description : Domain of unknown function DUF1605; DEAD/DEAH box helicase domain; Helicase, C-terminal [Interproscan].


Gene families : OG_01_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0017s0208.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cre07.g352251 30775310 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana 0.03 OrthoFinder
XM_002502185.1 MICPUN_81845, 81845 Helicase, C-terminal; Helicase-associated domain; Domain... 0.02 OrthoFinder
XM_002508301.1 MICPUN_61000, 61000 DEAD/DEAH box helicase 0.03 OrthoFinder
XM_003057297.1 MicpuC2_25774, 25774 Helicase, C-terminal; Helicase-associated domain; Domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR011709 DUF1605 1253 1316
IPR001650 Helicase_C 898 1028
IPR011545 DEAD/DEAH_box_helicase_dom 704 854
No external refs found!