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  5. Vocar.0017s0173.1

Vocar.0017s0173.1 (32891421)


Aliases : 32891421

Description : Elongation factor EFG, domain V-like; 116kDa U5 small nuclear ribonucleoprotein component, N-terminal; Translation elongation factor EFG/EF2, domain IV; Transcription factor, GTP-binding domain; Translation elongation factor EFTu-like, domain 2 [Interproscan].


Gene families : OG_01_0000224 (OrthoFinder) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0017s0173.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000704.34 tig00000704_g3322.t1 Elongation factor 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020904.69 tig00020904_g15202.t1 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder
Cre12.g516200 30792542, EFG2 Protein biosynthesis.translation elongation.eEF2... 0.03 OrthoFinder
Cre17.g737250 30781623, EFG5 RNA processing.RNA splicing.U2-type-intron-specific... 0.06 OrthoFinder
Cz02g31270.t1 No alias Translation elongation factor EFG/EF2, domain IV;... 0.02 OrthoFinder
Cz04g12070.t1 No alias Translation elongation factor EFTu-like, domain 2;... 0.02 OrthoFinder
EOD10726 No alias Elongation factor EFG, domain V-like; 116kDa U5 small... 0.03 OrthoFinder
OT_07G00360.1 No alias Translation elongation factor EFTu-like, domain 2;... 0.03 OrthoFinder
Sro971_g226420.1 Contig3611.g27891 109 kDa U5 small nuclear ribonucleoprotein component GFL 0.02 OrthoFinder
SymbC1.scaffold738.2 738.2 Transcription factor, GTP-binding domain; Elongation... 0.01 OrthoFinder
SymbC1.scaffold759.3 759.3 Elongation factor EFG, domain V-like; Transcription... 0.01 OrthoFinder
SymbC1.scaffold8222.1 8222.1 Transcription factor, GTP-binding domain; Elongation... 0.01 OrthoFinder
lcl|BLLF01000888.1_cds_GFH15706.1_10183 HaLaN_11984, GFH15706 Putative GTP-binding protein TypA/BipA like protein 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60836.1_4725 PRW60836 116 kDa U5 small nuclear ribonucleo component-like isoform A 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32859.1_3864 PRW32859 Ribosomal S5 Elongation factor G III V family 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004484 mRNA guanylyltransferase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006370 7-methylguanosine mRNA capping IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0030150 protein import into mitochondrial matrix IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
BP GO:0070585 protein localization to mitochondrion IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0072655 establishment of protein localization to mitochondrion IEP Enrichment
CC GO:0090730 Las1 complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
CC GO:1902555 endoribonuclease complex IEP Enrichment
CC GO:1902911 protein kinase complex IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 137 409
IPR031950 EFTUD2_N 3 116
IPR004161 EFTu-like_2 511 584
IPR005517 Transl_elong_EFG/EF2_IV 728 842
IPR000640 EFG_V-like 845 933
No external refs found!