1. Home
  2. Species
  3. Volvox carteri
  4. Sequence
  5. Vocar.0017s0070.1

Vocar.0017s0070.1 (32891389)


Aliases : 32891389

Description : tRNA-dihydrouridine synthase [Interproscan].


Gene families : OG_01_0001054 (OrthoFinder) Phylogenetic Tree(s): OG0001054_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0017s0070.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.80 tig00000241_g20942.t1 RNA processing.RNA modification.dihydrouridylation.tRNA... 0.03 OrthoFinder
Cre04.g229948 30791118 RNA processing.RNA modification.dihydrouridylation.tRNA... 0.02 OrthoFinder
OT_10G01720.1 No alias tRNA-dihydrouridine synthase [Interproscan]. 0.03 OrthoFinder
PTI_12G00560.1 No alias tRNA-dihydrouridine synthase [Interproscan]. 0.03 OrthoFinder
TP03G09810.1 No alias tRNA-dihydrouridine synthase [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61399.1_401 PRW61399 TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0008033 tRNA processing IEA Interproscan
MF GO:0017150 tRNA dihydrouridine synthase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
InterPro domains Description Start Stop
IPR001269 DUS_fam 162 421
No external refs found!