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  5. Vocar.0016s0276.1

Vocar.0016s0276.1 (32898062)


Aliases : 32898062

Description : AMP-binding enzyme, C-terminal domain; AMP-dependent synthetase/ligase [Interproscan].


Gene families : OG_01_0000298 (OrthoFinder) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0016s0276.1
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Cre12.g507400 30793628 Lipid metabolism.lipid degradation.fatty acid... 0.05 OrthoFinder
Cz05g30060.t1 No alias AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.03 OrthoFinder
Cz07g22230.t1 No alias AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.02 OrthoFinder
EOD14847 No alias Endonuclease/exonuclease/phosphatase; AMP-dependent... 0.03 OrthoFinder
EOD27693 No alias Long chain acyl-CoA synthetase [Ensembl]. 0.01 OrthoFinder
EOD28735 No alias Long-chain-fatty-acid-CoA ligase [Ensembl]. 0.02 OrthoFinder
EOD37178 No alias Acyl-CoA synthetase, long-chain [Ensembl]. 0.01 OrthoFinder
OT_12G00930.1 No alias AMP-dependent synthetase/ligase [Interproscan]. 0.02 OrthoFinder
XM_003054927.1 MicpuC2_46244, 46244 AMP-dependent synthetase/ligase [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
CC GO:0017053 transcription repressor complex IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019902 phosphatase binding IEP Enrichment
MF GO:0019903 protein phosphatase binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 566 608
IPR000873 AMP-dep_Synth/Lig 90 556
No external refs found!