1. Home
  2. Species
  3. Volvox carteri
  4. Sequence
  5. Vocar.0016s0267.1

Vocar.0016s0267.1 (32897866)


Aliases : 32897866

Description : DNA (cytosine-5)-methyltransferase 1, replication foci domain; ARID DNA-binding domain; WHIM1 domain [Interproscan].


Gene families : OG_01_0000178 (OrthoFinder) Phylogenetic Tree(s): OG0000178_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0016s0267.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01003236.1_cds_GFH26775.1_21252 HaLaN_24982, GFH26775 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR028942 WHIM1_dom 537 577
IPR001606 ARID_dom 1459 1553
IPR022702 Cytosine_MeTrfase1_RFD 13 130
No external refs found!