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  5. Vocar.0016s0153.1

Vocar.0016s0153.1 (32898073)


Aliases : 32898073

Description : Small GTPase superfamily, ARF/SAR type [Interproscan].


Gene families : OG_01_0000272 (OrthoFinder) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0016s0153.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021127.129 tig00021127_g18809.t2 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cre12.g486250 30793268, ARL6 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cre12.g487850 30791682 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cz05g21190.t1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.06 OrthoFinder
Cz13g04090.t1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
Dusal.0088s00030.1 33203564 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
Dusal.0175s00026.1 33199731 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
EOD20037 No alias ARL1, ARF-like GTPase [Ensembl]. 0.02 OrthoFinder
Sro229_g093190.1 Contig429.g5823 ADP-ribosylation factor 0.04 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495757.1_1755 KAA8495757 ADP-ribosylation factor 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0016559 peroxisome fission IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0035145 exon-exon junction complex IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
BP GO:0048285 organelle fission IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 177
No external refs found!