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  5. Vocar.0016s0095.1

Vocar.0016s0095.1 (32898128)


Aliases : 32898128

Description : Metallo-beta-lactamase [Interproscan].


Gene families : OG_01_0001390 (OrthoFinder) Phylogenetic Tree(s): OG0001390_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0016s0095.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
EOD20452 No alias Metallo-beta-lactamase [Interproscan]. 0.02 OrthoFinder
Sro2704_g335160.1 Contig3387.g26485 Ribonuclease Z 0.01 OrthoFinder
SymbC1.scaffold6617.2 6617.2 SAP domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58803.1_7001 PRW58803 Zinc phosphodiesterase ELAC 1 isoform A 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
CC GO:0030677 ribonuclease P complex IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
CC GO:1902555 endoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 215 272
No external refs found!