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  5. Vocar.0016s0057.1

Vocar.0016s0057.1 (32898215)


Aliases : 32898215

Description : Photosystem I PsaE, reaction centre subunit IV [Interproscan].


Gene families : OG_01_0003438 (OrthoFinder) Phylogenetic Tree(s): OG0003438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0016s0057.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Cre10.g420350 30790216, PSAE Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.2 OrthoFinder
Cz04g01180.t1 No alias Photosystem I PsaE, reaction centre subunit IV [Interproscan]. 0.1 OrthoFinder
Dusal.0303s00016.1 33185555 Photosystem I PsaE, reaction centre subunit IV [Interproscan]. 0.04 OrthoFinder
EOD32200 No alias Photosystem I reaction center subunit IV [Ensembl]. 0.05 OrthoFinder
OT_02G03600.1 No alias Photosystem I PsaE, reaction centre subunit IV [Interproscan]. 0.08 OrthoFinder
Transcript_contig_79982 79982 Photosystem I PsaE, reaction centre subunit IV [Interproscan]. 0.06 OrthoFinder
XM_002502014.1 MICPUN_90731, 90731 Photosystem I reaction center subunit IV, chloroplast... 0.06 OrthoFinder
XM_003057427.1 MicpuC2_32586, 32586 Photosystem I subunit IV, chloroplast precursor (PSAE) 0.02 OrthoFinder
lcl|BLLF01000146.1_cds_GFH08215.1_2692 HaLaN_03145, GFH08215 Photosystem I 8.1 kDa protein 0.08 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61312.1_185 PRW61312 Photosystem I reaction center subunit IV 0.12 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009538 photosystem I reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0034357 photosynthetic membrane IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
CC GO:0042651 thylakoid membrane IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003375 PSI_PsaE 42 98
No external refs found!