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Aliases : 32898156
Description : CobW/HypB/UreG, nucleotide-binding domain; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal [Interproscan].
Gene families : OG_01_0000111 (OrthoFinder) Phylogenetic Tree(s): OG0000111_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0016s0023.1 | |
| Cluster | HCCA: Cluster_56 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020556.61 | tig00020556_g11027.t1 | No description available | 0.01 | OrthoFinder | |
| Dusal.0243s00006.1 | 33198359 | CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... | 0.02 | OrthoFinder | |
| OT_13G01460.1 | No alias | CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Enrichment |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Enrichment |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Enrichment |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008199 | ferric iron binding | IEP | Enrichment |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Enrichment |
| CC | GO:0009349 | riboflavin synthase complex | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0010024 | phytochromobilin biosynthetic process | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Enrichment |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Enrichment |
| MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | Enrichment |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Enrichment |
| MF | GO:0016972 | thiol oxidase activity | IEP | Enrichment |
| BP | GO:0017004 | cytochrome complex assembly | IEP | Enrichment |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Enrichment |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Enrichment |
| CC | GO:0033180 | proton-transporting V-type ATPase, V1 domain | IEP | Enrichment |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0042802 | identical protein binding | IEP | Enrichment |
| MF | GO:0042803 | protein homodimerization activity | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| MF | GO:0050897 | cobalt ion binding | IEP | Enrichment |
| MF | GO:0051087 | chaperone binding | IEP | Enrichment |
| BP | GO:0051202 | phytochromobilin metabolic process | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| MF | GO:0060590 | ATPase regulator activity | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0070070 | proton-transporting V-type ATPase complex assembly | IEP | Enrichment |
| BP | GO:0070071 | proton-transporting two-sector ATPase complex assembly | IEP | Enrichment |
| BP | GO:0070072 | vacuolar proton-transporting V-type ATPase complex assembly | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| No external refs found! |