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  5. Vocar.0015s0349.1

Vocar.0015s0349.1 (32899084)


Aliases : 32899084

Description : Pre-mRNA-splicing factor 38 [Interproscan].


Gene families : OG_01_0002202 (OrthoFinder) Phylogenetic Tree(s): OG0002202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0015s0349.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
EOD03851 No alias Pre-mRNA-splicing factor 38 [Interproscan]. 0.03 OrthoFinder
EOD25981 No alias Pre-mRNA-splicing factor 38 [Interproscan]. 0.03 OrthoFinder
OT_04G01660.1 No alias Pre-mRNA-splicing factor 38 [Interproscan]. 0.03 OrthoFinder
Transcript_contig_61399 61399 Pre-mRNA-splicing factor 38 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR005037 PRP38 3 163
No external refs found!