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- Volvox carteri
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- Vocar.0015s0308.1
Vocar.0015s0308.1 (32898838)
Aliases : 32898838
Description : Cyclin-dependent kinase, regulatory subunit [Interproscan].
Gene families :
ECC Pair graph <a href="/family/view/2203">OG_01_0002204</a> (OrthoFinder) Phylogenetic Tree(s): <a href="/tree/view/2203">OG0002204_tree</a> </p> <p><strong>Sequence :</strong> <a href="/sequence/modal/coding/350231" data-target="#profileModal">coding</a> (<a href="/sequence/fasta/coding/350231">download</a>), <a href="/sequence/modal/protein/350231" data-target="#profileModal">protein</a> (<a href="/sequence/fasta/protein/350231">download</a>) </p> </div> <h3 class="banner-blue" id="expression_profile">Expression Profile</h3> <div class="pull-right"> <a href="#" class="btn btn-default" id="enable_pan" data-toggle="tooltip" title="Toggle Pan"><i class="fa fa-arrows" aria-hidden="true"></i></a> <a href="#" class="btn btn-default" id="enable_zoom" data-toggle="tooltip" title="Toggle zoom"><i class="fa fa-search" aria-hidden="true"></i></a> </div> <div style="height:550px; max-height:550px; margin-top:30px"> <canvas id="expression-profile" class="center-block" height="550"/> </div> <br> <div class="pull-right"> <a href="/profile/download/plot/328021" class="btn btn-primary" download="plot_328021.txt">Download</a> </div> <p><strong>Note:</strong>Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available <a href="/profile/view/328021">here</a>.</p> <br> <div> <h3 class="banner-blue" id="coexpression_networks">Co-expression Networks</h3> <div class="table-responsive"> <table class="table table-striped table-separated" id="coexpression_table"> <thead> <tr> <th data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th>Actions</th> </tr> </thead> <tbody> <tr> <td><abbr title="Click to show help" href="/help/neighborhood" data-target="#helpModal">Neighborhood</abbr></td> <td>HRR: <strong>Vocar.0015s0308.1</strong></td> <td><a href="/network/download/neighbors/314216" data-toggle="tooltip" data-placement="top" title="Download direct neighbors" download="neighbors_314216.txt"><i class="fa fa-list"></i></span> <a href="/network/graph/314216" data-toggle="tooltip" data-placement="top" title="View neighborhood as graph"><i class="fa fa-sitemap"></i></a> <span class="text-muted" data-toggle="tooltip" data-placement="top" title="Disabled for neighborhoods"><i class="fa fa-area-chart"></i></span> <span class="text-muted" data-toggle="tooltip" data-placement="top" title="Disabled for neighborhoods"><i class="fa fa-table"></i></span></td> </tr> <tr> <td><abbr title="Click to show help" href="/help/cluster" data-target="#helpModal">Cluster</abbr></td> <td>HCCA: <strong><a href="/cluster/view/5445" class="qtip_tooltip" qtip_href="/cluster/tooltip/5445">Cluster_69</a></strong></td> <td><a href="/cluster/view/5445" data-toggle="tooltip" data-placement="top" title="View cluster as table"><i class="fa fa-list"></i></a> <a href="/cluster/graph/5445" data-toggle="tooltip" data-placement="top" title="View cluster as graph"><i class="fa fa-sitemap"></i></a> <a href="/profile_comparison/cluster/5445" data-toggle="tooltip" data-placement="top" title="Compare profiles in this cluster"><i class="fa fa-area-chart"></i></a> <a href="/heatmap/cluster/5445" data-toggle="tooltip" data-placement="top" title="Heatmap of profiles in this cluster"><i class="fa fa-table"></i></a></td> </tr> </tbody> </table> </div> </div> <br> <h3 class="banner-blue" id="expression_conservation">Expression Context Conservation (<abbr title="Click to show help" href="/help/ecc" data-target="#helpModal">ECC</abbr>)</h3> <div class="table-responsive"> <table class="table table-striped table-separated" id="ecc_hits_table"> <thead> <tr> <th data-sort="string-ins"><span class="sort-icon"></span>Target</th> <th data-sort="string-ins"><span class="sort-icon"></span>Alias</th> <th data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th data-sort="float"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/ecc" data-target="#helpModal">ECC</abbr> score</th> <th data-sort="string-ins"><span class="sort-icon"></span>Gene Family Method</th> <th>Actions</th> </tr> </thead> <tbody> <tr> <td><a href="/sequence/view/9776" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/9776">Cpa|evm.model.tig00000944.39</a></td> <td>tig00000944_g5961.t1</td> <td>Cell cycle.regulation.cyclin-dependent kinase...</td> <td>0.02</td> <td>OrthoFinder</td> <td><a href="/ecc/graph_pair/440492" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/350231/18/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/46045" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/46045">Cre03.g180350</a></td> <td>30787507, CKS1</td> <td>Cell cycle.regulation.cyclin-dependent kinase...</td> <td>0.05</td> <td>OrthoFinder</td> <td><a href="/ecc/graph_pair/440530" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/350231/18/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/88688" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/88688">Transcript_contig_68622</a></td> <td>68622</td> <td>Cyclin-dependent kinase, regulatory subunit [Interproscan].</td> <td>0.01</td> <td>OrthoFinder</td> <td><a href="/ecc/graph_pair/440598" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/350231/18/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/244196" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/244196">XM_002500015.1</a></td> <td>MICPUN_78882, 78882</td> <td>Hypothetical protein (CKS)</td> <td>0.02</td> <td>OrthoFinder</td> <td><a href="/ecc/graph_pair/440603" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/350231/18/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> </tbody> </table> </div> <br> <h3 class="banner-blue" id="annotation">Functional Annotation</h3> <div class="panel with-nav-tabs panel-default"> <div class="panel-heading"> <ul class="nav nav-tabs"> <li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li> <li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li> <li><a href="#tab3default" data-toggle="tab">InterPro</a></li> </ul> </div> <div> <div class="tab-content"> <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr class="parent_term" style="display: none" style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/2641" data-toggle="tooltip" data-placement="top" title=""A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. These actions are described from two distinct but related perspectives: (1) biochemical activity, and (2) role as a component in a larger system/process." [GOC:pdt]">GO:0003674</a></td> <td class="col-xs-6">molecular_function</td> <td class="col-xs-1">None</td> <td class="col-xs-2">Extended</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10319" data-toggle="tooltip" data-placement="top" title=""Modulates the activity of a cyclin-dependent protein serine/threonine kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins." [GOC:pr, GOC:rn, PMID:7877684, PMID:9442875]">GO:0016538</a></td> <td class="col-xs-6">cyclin-dependent protein serine/threonine kinase regulator activity</td> <td class="col-xs-1">IEA</td> <td class="col-xs-2">Interproscan</td> </tr> <tr class="parent_term" style="display: none" style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/11978" data-toggle="tooltip" data-placement="top" title=""Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule." [GOC:ai]">GO:0019207</a></td> <td class="col-xs-6">kinase regulator activity</td> <td class="col-xs-1">None</td> <td class="col-xs-2">Extended</td> </tr> <tr class="parent_term" style="display: none" style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/12616" data-toggle="tooltip" data-placement="top" title=""Modulates the activity of a protein kinase, an enzyme which phosphorylates a protein." [GOC:ai]">GO:0019887</a></td> <td class="col-xs-6">protein kinase regulator activity</td> <td class="col-xs-1">None</td> <td class="col-xs-2">Extended</td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/191" data-toggle="tooltip" data-placement="top" title=""A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins." [GOC:mah]">GO:0000226</a></td> <td class="col-xs-6">microtubule cytoskeleton organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/518" data-toggle="tooltip" data-placement="top" title=""A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures." [GOC:elh]">GO:0000786</a></td> <td class="col-xs-6">nucleosome</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/2644" data-toggle="tooltip" data-placement="top" title=""Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid)." [GOC:dph, GOC:jl, GOC:tb, GOC:vw]">GO:0003677</a></td> <td class="col-xs-6">DNA binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/4429" data-toggle="tooltip" data-placement="top" title=""Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles." [GOC:mah, ISBN:0198547684, PMID:16959967]">GO:0005856</a></td> <td class="col-xs-6">cytoskeleton</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/4451" data-toggle="tooltip" data-placement="top" title=""A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments." [GOC:jl, GOC:vw, PMID:12479800]">GO:0005885</a></td> <td class="col-xs-6">Arp2/3 protein complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/4847" data-toggle="tooltip" data-placement="top" title=""Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction." [ISBN:0198506732]">GO:0006310</a></td> <td class="col-xs-6">DNA recombination</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/4918" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage." [ISBN:0198506732]">GO:0006401</a></td> <td class="col-xs-6">RNA catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5459" data-toggle="tooltip" data-placement="top" title=""A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures." [GOC:dph, GOC:jl, GOC:mah]">GO:0007010</a></td> <td class="col-xs-6">cytoskeleton organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5462" data-toggle="tooltip" data-placement="top" title=""A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking." [GOC:mah]">GO:0007015</a></td> <td class="col-xs-6">actin filament organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5490" data-toggle="tooltip" data-placement="top" title=""A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart." [GOC:go_curators, GOC:mah]">GO:0007051</a></td> <td class="col-xs-6">spindle organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/6078" data-toggle="tooltip" data-placement="top" title=""Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament." [GOC:mah]">GO:0008064</a></td> <td class="col-xs-6">regulation of actin polymerization or depolymerization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/8446" data-toggle="tooltip" data-placement="top" title=""Any process that increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle." [GOC:dph, GOC:tb]">GO:0010638</a></td> <td class="col-xs-6">positive regulation of organelle organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/12558" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with oxygen (O2)." [GOC:jl]">GO:0019825</a></td> <td class="col-xs-6">oxygen binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/13266" data-toggle="tooltip" data-placement="top" title=""The cellular process that ensures successive accurate and complete genome replication and chromosome segregation." [GOC:isa_complete, GOC:mtg_cell_cycle]">GO:0022402</a></td> <td class="col-xs-6">cell cycle process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/14184" data-toggle="tooltip" data-placement="top" title=""Any process that controls the length of actin filaments in a cell." [GOC:dph, GOC:mah]">GO:0030832</a></td> <td class="col-xs-6">regulation of actin filament length</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/14185" data-toggle="tooltip" data-placement="top" title=""Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament." [GOC:mah]">GO:0030833</a></td> <td class="col-xs-6">regulation of actin filament polymerization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/14190" data-toggle="tooltip" data-placement="top" title=""Any process that activates or increases the frequency, rate or extent of actin polymerization." [GOC:mah]">GO:0030838</a></td> <td class="col-xs-6">positive regulation of actin filament polymerization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/14644" data-toggle="tooltip" data-placement="top" title=""Any process that activates or increases the frequency, rate or extent of protein complex assembly." [GOC:mah]">GO:0031334</a></td> <td class="col-xs-6">positive regulation of protein-containing complex assembly</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/15545" data-toggle="tooltip" data-placement="top" title=""Any process that modulates the frequency, rate or extent of the process of creating protein polymers." [GOC:mah]">GO:0032271</a></td> <td class="col-xs-6">regulation of protein polymerization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/15547" data-toggle="tooltip" data-placement="top" title=""Any process that activates or increases the frequency, rate or extent of the process of creating protein polymers." [GOC:mah]">GO:0032273</a></td> <td class="col-xs-6">positive regulation of protein polymerization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/15573" data-toggle="tooltip" data-placement="top" title=""A protein complex that possesses ribonuclease H activity, in which the catalytic subunit is a member of the RNase H2 (or HII) class. For example, in Saccharomyces the complex contains Rnh201p, Rnh202p and Rnh203p." [GOC:mah, PMID:14734815]">GO:0032299</a></td> <td class="col-xs-6">ribonuclease H2 complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/15787" data-toggle="tooltip" data-placement="top" title=""A process that modulates the size of a cellular component." [GOC:mah]">GO:0032535</a></td> <td class="col-xs-6">regulation of cellular component size</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/16179" data-toggle="tooltip" data-placement="top" title=""Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins." [GOC:mah]">GO:0032956</a></td> <td class="col-xs-6">regulation of actin cytoskeleton organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/16193" data-toggle="tooltip" data-placement="top" title=""Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the actin cytoskeleton." [GOC:mah]">GO:0032970</a></td> <td class="col-xs-6">regulation of actin filament-based process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/16214" data-toggle="tooltip" data-placement="top" title=""A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together." [GOC:dos, GOC:mah]">GO:0032991</a></td> <td class="col-xs-6">protein-containing complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/16216" data-toggle="tooltip" data-placement="top" title=""A macromolecular complex containing both protein and DNA molecules." [GOC:mah]">GO:0032993</a></td> <td class="col-xs-6">protein-DNA complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/16265" data-toggle="tooltip" data-placement="top" title=""Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle." [GOC:mah]">GO:0033043</a></td> <td class="col-xs-6">regulation of organelle organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/17497" data-toggle="tooltip" data-placement="top" title=""The actin nucleation process in which actin monomers combine to form a new branch on the side of an existing actin filament; mediated by the Arp2/3 protein complex and its interaction with other proteins." [GOC:mah, PMID:16959963, PMID:18640983]">GO:0034314</a></td> <td class="col-xs-6">Arp2/3 complex-mediated actin nucleation</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21181" data-toggle="tooltip" data-placement="top" title=""Any process that modulates the frequency, rate or extent of protein complex assembly." [GOC:jl]">GO:0043254</a></td> <td class="col-xs-6">regulation of protein-containing complex assembly</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21949" data-toggle="tooltip" data-placement="top" title=""Any process that modulates the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component." [GOC:jl]">GO:0044087</a></td> <td class="col-xs-6">regulation of cellular component biogenesis</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21951" data-toggle="tooltip" data-placement="top" title=""Any process that activates or increases the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component." [GOC:jl]">GO:0044089</a></td> <td class="col-xs-6">positive regulation of cellular component biogenesis</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/22591" data-toggle="tooltip" data-placement="top" title=""A protein complex that plays a role in the process of DNA packaging." [GOC:jl]">GO:0044815</a></td> <td class="col-xs-6">DNA packaging complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/22663" data-toggle="tooltip" data-placement="top" title=""The initial step in the formation of an actin filament, in which actin monomers combine to form a new filament. Nucleation is slow relative to the subsequent addition of more monomers to extend the filament." [ISBN:0815316194]">GO:0045010</a></td> <td class="col-xs-6">actin nucleation</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/25843" data-toggle="tooltip" data-placement="top" title=""Any process that activates or increases the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule." [GOC:jid]">GO:0048518</a></td> <td class="col-xs-6">positive regulation of biological process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/25847" data-toggle="tooltip" data-placement="top" title=""Any process that activates or increases the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level." [GOC:jid]">GO:0048522</a></td> <td class="col-xs-6">positive regulation of cellular process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/27323" data-toggle="tooltip" data-placement="top" title=""Any process that activates or increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope." [GOC:ai]">GO:0051130</a></td> <td class="col-xs-6">positive regulation of cellular component organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/27416" data-toggle="tooltip" data-placement="top" title=""The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart." [GOC:ai, GOC:expert_rg, GOC:mtg_sensu, GOC:tb]">GO:0051225</a></td> <td class="col-xs-6">spindle assembly</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/27664" data-toggle="tooltip" data-placement="top" title=""Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures." [GOC:ai]">GO:0051493</a></td> <td class="col-xs-6">regulation of cytoskeleton organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/27666" data-toggle="tooltip" data-placement="top" title=""Any process that activates or increases the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures." [GOC:ai]">GO:0051495</a></td> <td class="col-xs-6">positive regulation of cytoskeleton organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/31822" data-toggle="tooltip" data-placement="top" title=""A protein complex that localizes to interphase centrosomes and to mitotic spindle tubules and regulates mitotic spindle assembly and centrosome integrity; in human, the complex consists of eight subunits, some of which are homologous to subunits of the Drosophila Augmin complex." [PMID:19427217]">GO:0070652</a></td> <td class="col-xs-6">HAUS complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/32082" data-toggle="tooltip" data-placement="top" title=""The aggregation, arrangement and bonding together of a set of components to form an organelle. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane." [GOC:mah]">GO:0070925</a></td> <td class="col-xs-6">organelle assembly</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/34529" data-toggle="tooltip" data-placement="top" title=""Any process that modulates the size of an anatomical structure." [GOC:dph, GOC:tb]">GO:0090066</a></td> <td class="col-xs-6">regulation of anatomical structure size</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/35186" data-toggle="tooltip" data-placement="top" title=""Binding specifically to a substance (cargo) to deliver it to a COPII transport vesicle. Cargo receptors span a membrane (either the plasma membrane or a vesicle membrane), binding simultaneously to cargo molecules and coat adaptors, to efficiently recruit soluble proteins to nascent vesicles." [GOC:rb, PMID:16957051, PMID:20236934]">GO:0097020</a></td> <td class="col-xs-6">COPII receptor activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/35591" data-toggle="tooltip" data-placement="top" title=""A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a supramolecular fiber, a polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure." [GOC:pr]">GO:0097435</a></td> <td class="col-xs-6">supramolecular fiber organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/38258" data-toggle="tooltip" data-placement="top" title=""Any process that modulates the frequency, rate or extent of actin filament organization." [GOC:kmv]">GO:0110053</a></td> <td class="col-xs-6">regulation of actin filament organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/42038" data-toggle="tooltip" data-placement="top" title=""Any process that modulates the frequency, rate or extent of supramolecular fiber organization." [GO_REF:0000058, GOC:PARL, GOC:rl, GOC:TermGenie, PMID:23921388]">GO:1902903</a></td> <td class="col-xs-6">regulation of supramolecular fiber organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/42040" data-toggle="tooltip" data-placement="top" title=""Any process that activates or increases the frequency, rate or extent of supramolecular fiber organization." [GO_REF:0000058, GOC:PARL, GOC:rl, GOC:TermGenie, PMID:23921388]">GO:1902905</a></td> <td class="col-xs-6">positive regulation of supramolecular fiber organization</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="interpro_table"> <thead> <tr> <th class="col-xs-3" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/interpro_domain" data-target="#helpModal">InterPro domains</abbr></th> <th class="col-xs-5" data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Start</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Stop</th> </tr> </thead> <tbody> <tr> <td class="col-xs-3"><a href="/interpro/view/641">IPR000789</a></td> <td class="col-xs-5">Cyclin-dep_kinase_reg-sub</td> <td class="col-xs-2">6</td> <td class="col-xs-2">73</td> </tr> </tbody> </table> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">protists.guru</a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted">About</a></div> <div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div> <div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div> <div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script>
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