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  5. Vocar.0015s0302.1

Vocar.0015s0302.1 (32898848)


Aliases : 32898848

Description : Sec23/Sec24, trunk domain; Gelsolin-like domain; Sec23/Sec24, helical domain; Zinc finger, Sec23/Sec24-type; Sec23/Sec24 beta-sandwich [Interproscan].


Gene families : OG_01_0001655 (OrthoFinder) Phylogenetic Tree(s): OG0001655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0015s0302.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001408.15 tig00001408_g8610.t1 Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder
Cre03.g180850 30786735, SEC23A Vesicle trafficking.Coat protein II (COPII) coatomer... 0.13 OrthoFinder
EOD30731 No alias Sec23/Sec24 beta-sandwich; Gelsolin-like domain;... 0.04 OrthoFinder
PTI_01G03450.1 No alias Gelsolin-like domain; Sec23/Sec24, helical domain;... 0.02 OrthoFinder
Sro972_g226640.1 Contig330.g4393 Transport protein SEC23 0.04 OrthoFinder
Transcript_contig_58075 58075 Gelsolin-like domain; Sec23/Sec24 beta-sandwich;... 0.01 OrthoFinder
XM_002505940.1 MICPUN_107228, 107228 Sec23/Sec24, helical domain; Sec23/Sec24, trunk domain;... 0.02 OrthoFinder
XM_002508302.1 MICPUN_61002, 61002 Sec23/Sec24, helical domain; Sec23/Sec24, trunk domain;... 0.02 OrthoFinder
XM_003057122.1 MicpuC2_56027, 56027 Gelsolin-like domain; Sec23/Sec24, helical domain;... 0.02 OrthoFinder
lcl|BLLF01000060.1_cds_GFH06871.1_1348 HaLaN_01583, GFH06871 Protein transport protein SEC23 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32992.1_3755 PRW32992 Transport SEC23-like 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006900 Sec23/24_helical_dom 522 620
IPR006896 Sec23/24_trunk_dom 120 391
IPR012990 Sec23_24_beta_S 404 508
IPR006895 Znf_Sec23_Sec24 53 91
IPR007123 Gelsolin-like_dom 636 722
No external refs found!