Vocar.0015s0272.1 (32898924)

Aliases : 32898924

Description : Blue (type 1) copper domain [Interproscan].

Gene families : OG_01_0004408 (OrthoFinder) Phylogenetic Tree(s): OG0004408_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Vocar.0015s0272.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Cre03.g182551 30787991, PCY1 Photosynthesis.photophosphorylation.Cytb6/f to PS-I... 0.14 OrthoFinder
Cz01g35130.t1 No alias Blue (type 1) copper domain [Interproscan]. 0.07 OrthoFinder
Dusal.0268s00024.1 33190619 Blue (type 1) copper domain [Interproscan]. 0.05 OrthoFinder
OT_09G04300.1 No alias Blue (type 1) copper domain [Interproscan]. 0.06 OrthoFinder
XM_002504026.1 MICPUN_60322, 60322 Plastocyanin, chloroplast precursor (PETE) 0.03 OrthoFinder
XM_003059555.1 MicpuC2_59039, 59039 Plastocyanin, chloroplast precursor (PETE) 0.02 OrthoFinder
lcl|BLLF01000003.1_cds_GFH05618.1_95 HaLaN_00115, GFH05618 Plastocyanin 0.01 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33178.1_3440 PRW33178 Chloroplast precursor 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0009055 electron transfer activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034357 photosynthetic membrane IEP Enrichment
CC GO:0042651 thylakoid membrane IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000923 BlueCu_1 49 144
No external refs found!